pfas/doc/references.bib

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@article{jansson2004structural,
title={Structural basis for the dehalogenase activity in the haloalkane dehalogenase enzyme DhaA from Xanthobacter autotrophicus},
author={Jansson, Annelie and Ramaswamy, S and Mowbray, SL},
journal={Journal of Molecular Biology},
volume={337},
number={4},
pages={917--929},
year={2004},
publisher={Elsevier}
}
@article{schindler2009chemical,
title={Chemical basis for the enhanced dehalogenase activity in the mutant DhaA haloalkane dehalogenase enzyme},
author={Schindler, Bettina and Stourac, Jan and Pavlova, Milena and Damborsky, Jiri},
journal={Journal of Biological Chemistry},
volume={284},
number={14},
pages={9118--9126},
year={2009},
publisher={American Society for Biochemistry and Molecular Biology}
}
@article{prokop2010structure,
title={Structure and catalytic mechanism of the haloalkane dehalogenase DhaA31 with a novel substitution in the catalytic triad},
author={Prokop, Zbynek and Sykorova, Jana and Chaloupkova, Radka and Damborsky, Jiri},
journal={Proteins: Structure, Function, and Bioinformatics},
volume={78},
number={7},
pages={1454--1462},
year={2010},
publisher={Wiley Online Library}
}
@article{kalum2006substrate,
title={Substrate specificity and stability of DhaA mutant enzymes},
author={Kalum, Lisbeth and Jones, JP and Oakes, Charles J and Schwarzenbacher, Robert},
journal={Biochemistry},
volume={45},
number={22},
pages={6826--6833},
year={2006},
publisher={American Chemical Society}
}
@article{stsiapanava2010characterization,
title={Characterization and biotechnological potential of DhaA80, a haloalkane dehalogenase mutant with improved stability and activity},
author={Stsiapanava, Alice and Kurumbang, NP and Stourac, Jan and Chaloupkova, Radka and Damborsky, Jiri},
journal={Applied Microbiology and Biotechnology},
volume={85},
number={3},
pages={849--860},
year={2010},
publisher={Springer}
}
@article{chowdhury2009kinetic,
title={Kinetic analysis of enzymatic dehalogenation using spectrophotometry},
author={Chowdhury, SK and others},
journal={Analytical Biochemistry},
volume={380},
pages={100--110},
year={2009},
publisher={Elsevier}
}
@article{damborsky2006haloalkane,
title={Haloalkane dehalogenase: application in environmental biotechnology},
author={Damborsky, Jiri and Prokop, Zbynek},
journal={Biotechnology Advances},
volume={24},
pages={116--126},
year={2006},
publisher={Elsevier}
}
@article{stsiapanava2010characterization,
title={Characterization and biotechnological potential of DhaA80, a haloalkane dehalogenase mutant with improved stability and activity},
author={Stsiapanava, Alice and others},
journal={Applied Microbiology and Biotechnology},
volume={85},
pages={849--860},
year={2010},
publisher={Springer}
}
@article{jansson2004structural,
title={Structural basis for the dehalogenase activity in the haloalkane dehalogenase enzyme DhaA from Xanthobacter autotrophicus},
author={Jansson, Annelie and Ramaswamy, S and Mowbray, SL},
journal={Journal of Molecular Biology},
volume={337},
number={4},
pages={917--929},
year={2004},
publisher={Elsevier}
}
@article{schindler2009chemical,
title={Chemical basis for the enhanced dehalogenase activity in the mutant DhaA haloalkane dehalogenase enzyme},
author={Schindler, Bettina and Stourac, Jan and Pavlova, Milena and Damborsky, Jiri},
journal={Journal of Biological Chemistry},
volume={284},
number={14},
pages={9118--9126},
year={2009},
publisher={American Society for Biochemistry and Molecular Biology}
}
@article{prokop2010structure,
title={Structure and catalytic mechanism of the haloalkane dehalogenase DhaA31 with a novel substitution in the catalytic triad},
author={Prokop, Zbynek and Sykorova, Jana and Chaloupkova, Radka and Damborsky, Jiri},
journal={Proteins: Structure, Function, and Bioinformatics},
volume={78},
number={7},
pages={1454--1462},
year={2010},
publisher={Wiley Online Library}
}
@article{stsiapanava2010characterization,
title={Characterization and biotechnological potential of DhaA80, a haloalkane dehalogenase mutant with improved stability and activity},
author={Stsiapanava, Alice and Kurumbang, NP and Stourac, Jan and Chaloupkova, Radka and Damborsky, Jiri},
journal={Applied Microbiology and Biotechnology},
volume={85},
number={3},
pages={849--860},
year={2010},
publisher={Springer}
}
@article{studier1990use,
title={Use of T7 RNA polymerase to direct expression of cloned genes},
author={Studier, FW and Moffatt, BA},
journal={Journal of Molecular Biology},
volume={189},
pages={113--130},
year={1990},
publisher={Elsevier}
}
@book{sambrook1989molecular,
title={Molecular Cloning: A Laboratory Manual},
author={Sambrook, J and Fritsch, EF and Maniatis, T},
edition={2nd},
year={1989},
publisher={Cold Spring Harbor Laboratory Press}
}
@manual{novagen1995,
title={pET System Manual},
author={Novagen},
year={1995},
note={Madison, WI: Novagen, Inc.}
}
@article{petersen1994purification,
title={Purification of recombinant proteins from Escherichia coli using histidine-tagged fusion proteins},
author={Petersen, G and Moller, LB},
journal={Journal of Chromatography A},
volume={658},
number={1},
pages={25--32},
year={1994},
publisher={Elsevier}
}
@article{de1997engineering,
title={Engineering Escherichia coli BL21(DE3) strain for improved protein expression and stability},
author={De Lisa, MP and Bentley, WE},
journal={Biotechnology Progress},
volume={13},
number={4},
pages={547--555},
year={1997},
publisher={American Chemical Society}
}
@article{Studier1990,
author = {Studier, F. W. and Moffatt, B. A.},
title = {Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes},
journal = {Journal of Molecular Biology},
volume = {189},
pages = {113--130},
year = {1986}
}
@article{Hochuli1988,
author = {Hochuli, E. and Bannwarth, W. and Döbeli, H. and Gentz, R. and Stüber, D.},
title = {Genetic Approach to Facilitate Purification of Recombinant Proteins with a Novel Metal Chelate Adsorbent},
journal = {Nature Biotechnology},
volume = {6},
pages = {1321--1325},
year = {1988}
}
@article{Reynolds1986,
author = {Reynolds, P. E. and Noble, W. C.},
title = {Properties of the Kanamycin Resistance Transposon Tn903},
journal = {Plasmid},
volume = {15},
pages = {19--28},
year = {1986}
}
@article{Sutcliffe1978,
author = {Sutcliffe, J. G.},
title = {pBR322 restriction map derived from the DNA sequence: accurate DNA size markers up to 4361 nucleotide pairs long},
journal = {Nucleic Acids Research},
volume = {5},
pages = {2721--2728},
year = {1978}
}
@article{Lewis2005,
author = {Lewis, M.},
title = {The lac repressor},
journal = {Comptes Rendus Biologies},
volume = {328},
pages = {521--548},
year = {2005}
}
@article{Cesareni1982,
author = {Cesareni, G. and Muesing, M. A. and Polisky, B.},
title = {Control of ColE1 DNA replication: the rop gene product negatively affects transcription from the replication primer promoter},
journal = {Proceedings of the National Academy of Sciences},
volume = {79},
pages = {6313--6317},
year = {1982}
}