record.features

gfp2.py

@@ -81,6 +81,42 @@ for feature in record.features:
 #%%
 
 
+#%%
+
+# Przejdź przez wszystkie funkcje w rekordzie i wypisz ich szczegółowe informacje
+for feature in record.features:
+    if feature.type in ["promoter", "RBS","CDS", "protein_bind", "misc_feature", "rep_origin"]:
+        print(f"Type: {feature.type}")
+        print(f"Location: {feature.location}")
+        print(f"Strand: {'+' if feature.strand == 1 else '-'}")
+
+        # Szczegółowe opisy
+        if feature.type == "CDS":
+            gene_name = feature.qualifiers.get('gene', ['Unknown gene'])[0]
+            product = feature.qualifiers.get('product', ['Unknown product'])[0]
+            print(f"Gene Name: {gene_name}")
+            print(f"Product: {product}")
+        elif feature.type == "protein_bind":
+            binding_site = feature.qualifiers.get('bound_moiety', ['Unknown binding site'])[0]
+            print(f"Binding Site: {binding_site}")
+        elif feature.type == "misc_feature":
+            note = feature.qualifiers.get('note', ['No additional information'])[0]
+            print(f"Note: {note}")
+        elif feature.type == "rep_origin":
+            print("This is a replication origin.")
+
+        # Pobierz sekwencję funkcji
+        feature_seq = record.seq[feature.location.start:feature.location.end]
+
+
+        print(f"Sequence ( ): {feature_seq}\n")
+        # Uwzględnij orientację nici (strand)
+        if feature.strand == -1:
+            feature_seq = feature_seq.reverse_complement()
+            print(f"Sequence (^): {feature_seq}\n")
+
+
+
 # Znajdź i wyświetl sekwencję terminatora T7
 for feature in record.features:
     if feature.type == "terminator" and "T7" in feature.qualifiers.get('note', [''])[0]:
@@ -108,9 +144,11 @@ for feature in record.features:
         if feature.strand == -1:
             terminator_seq = terminator_seq.reverse_complement()
         
-        print(f"Sequence: {terminator_seq}")
+        print(f"(+) Sequence: {terminator_seq}")
         print()
 
+#%%
+
 
 #%%
 t=record[25:73].seq